myRT

myRT report for GCA_001186505.1_ASM118650v1

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Seq: LGNI01000028.1 Vibrio cholerae O1 strain EM-1652A contig29, whole genome shotgun sequence (235772 bp)
Overview 1 RT 1: 123468-128703 bp Neighborhood of RT #1 [123468, 128729] TIGR02646 COG3950 RVT-Retrons LysR Feature: gene Location: 123468-124085 bp Feature: domain Description: TIGR02646 Location: 123579-123963 bp Feature: domain Description: TIGR02646 Location: 1 23579-1 23963 bp Feature: gene Location: 124098-125720 bp Feature: domain Description: COG3950 Location: 124284-125715 bp Feature: domain Description: COG3950 Location: 1 24284-1 2571 5 bp Feature: gene Location: 125721-126668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125835-126432 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25835-1 26432 bp Feature: gene Location: 127594-127866 bp Feature: gene Location: 127869-128729 bp Feature: domain Description: LysR Location: 127875-128703 bp Feature: domain Description: LysR Location: 1 27875-1 28703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)