myRT

myRT report for GCA_001187085.1_ASM118708v1

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Seq: LGOO01000142.1 Vibrio cholerae O1 strain NHCM-043 contig143, whole genome shotgun sequence (235697 bp)
Overview 1 RT 1: 123430-128665 bp Neighborhood of RT #1 [123430, 128691] TIGR02646 COG3950 RVT-Retrons LysR Feature: gene Location: 123430-124047 bp Feature: domain Description: TIGR02646 Location: 123541-123925 bp Feature: domain Description: TIGR02646 Location: 1 23541 -1 23925 bp Feature: gene Location: 124060-125682 bp Feature: domain Description: COG3950 Location: 124246-125677 bp Feature: domain Description: COG3950 Location: 1 24246-1 25677 bp Feature: gene Location: 125683-126630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125797-126394 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25797-1 26394 bp Feature: gene Location: 127556-127828 bp Feature: gene Location: 127831-128691 bp Feature: domain Description: LysR Location: 127837-128665 bp Feature: domain Description: LysR Location: 1 27837-1 28665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)