myRT

myRT report for GCA_001187425.1_ASM118742v1

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Seq: LGHY01000022.1 Streptococcus pneumoniae strain Case B serotypeable 28682_contig_22, whole genome shotgun sequence (121748 bp)
Overview 1 RT 1: 59499-64417 bp Neighborhood of RT #1 [59499, 64422] PRK04813 DUF3687 RVT-GII GIIM RVT-GII Feature: gene Location: 59499-61049 bp Ori: KNB47880.1 Feature: domain Description: PRK04813 Location: 59517-61044 bp Feature: domain Description: PRK0481 3 Location: 5951 7-61 044 bp Feature: gene Location: 61070-61201 bp Ori: KNB47881.1 Feature: domain Description: DUF3687 Location: 61082-61199 bp Feature: domain Description: DUF3687 Location: 61 082-61 1 99 bp Feature: gene Location: 63145-64137 bp Ori: KNB47882.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63148-63679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631 48-63679 bp Feature: domain Description: GIIM Note: maturase Location: 63733-63946 bp Feature: domain Description: GIIM Note: maturase Location: 63733-63946 bp Feature: gene Location: 64141-64422 bp Ori: KNB47883.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64345-64417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64345-6441 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), DUF3687 (pfam12459), RVT-GII, GIIM (pfam08388)

Seq: LGHY01000004.1 Streptococcus pneumoniae strain Case B serotypeable 28682_contig_4, whole genome shotgun sequence (138473 bp)
Overview 1 RT 1: 91961-95823 bp Neighborhood of RT #1 [91961, 95903] Fst_toxin GIIM RVT-GII Acetyltransf_10 RimL Feature: gene Location: 91961-92053 bp Ori: KNB48716.1 Feature: domain Description: Fst_toxin Location: 91979-92039 bp Feature: domain Description: Fst_toxin Location: 91979-92 039 bp Feature: gene Location: 92783-93169 bp Ori: KNB48717.1 Feature: domain Description: GIIM Note: maturase Location: 92786-92978 bp Feature: domain Description: GIIM Note: maturase Location: 92 786-92 978 bp Feature: gene Location: 93192-94040 bp Ori: KNB48718.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93396-93969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93396-93969 bp Feature: gene Location: 94780-95196 bp Ori: KNB48719.1 Feature: domain Description: Acetyltransf_10 Location: 94858-95149 bp Feature: domain Description: Acetyltransf_10 Location: 94858-95149 bp Feature: gene Location: 95208-95903 bp Ori: KNB48720.1 Feature: domain Description: RimL Location: 95331-95823 bp Feature: domain Description: RimL Location: 95331-9582 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fst_toxin (pfam13955), GIIM (pfam08388), RVT-GII, Acetyltransf_10 (pfam13673), RimL (COG1670)