myRT

myRT report for GCA_001187875.1_ASM118787v1

Download annotations/find similar RTs

Seq: LGIR01000015.1 Pseudomonas sp. RIT-PI-a NODE_7_length_238208_cov_26.9154_ID_13, whole genome shotgun sequence (238208 bp)
Overview 1 RT 1: 47848-52386 bp Neighborhood of RT #1 [47848, 52386] SLATT_5 RVT-UG17 Feature: gene Location: 47848-48309 bp Feature: gene Location: 48828-49388 bp Ori: KNC13656.1 Feature: domain Description: SLATT_5 Location: 48831-49323 bp Feature: domain Description: SLATT_5 Location: 48831 -49323 bp Feature: gene Location: 49701-51137 bp Ori: KNC13657.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 49971-50586 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 49971 -50586 bp Feature: gene Location: 51832-52386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: LGIR01000028.1 Pseudomonas sp. RIT-PI-a NODE_8_length_219377_cov_25.5973_ID_15, whole genome shotgun sequence (219377 bp)
Overview 1 RT 1: 82834-88195 bp Neighborhood of RT #1 [82834, 88195] LysR Aes RVT-UG3 Feature: gene Location: 82834-83748 bp Ori: KNC07730.1 Feature: domain Description: LysR Location: 82840-83707 bp Feature: domain Description: LysR Location: 82 840-83707 bp Feature: gene Location: 83751-84659 bp Ori: KNC07731.1 Feature: domain Description: Aes Location: 83940-84600 bp Feature: domain Description: Aes Location: 83940-84600 bp Feature: gene Location: 84951-86216 bp Ori: KNC07732.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 85242-85725 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 852 42 -8572 5 bp Feature: gene Location: 87728-88195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), Aes (COG0657), RVT-UG3