myRT

myRT report for GCA_001187905.1_ASM118790v1

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Seq: LGIS01000033.1 Pantoea sp. RIT-PI-b NODE_2_length_623809_cov_27.3686_ID_3, whole genome shotgun sequence (623809 bp)
Overview 1 RT 1: 507747-519944 bp Neighborhood of RT #1 [507747, 520009] DUF2000 Lrp RVT-UG5 nitrilase PL1_Passenger_AT autotrans_barl PBP2_MidA_like Feature: gene Location: 507747-508169 bp Ori: KNC05911.1 Feature: domain Description: DUF2000 Location: 507771-508167 bp Feature: domain Description: DUF2000 Location: 507771 -5081 67 bp Feature: gene Location: 508430-508891 bp Ori: KNC05912.1 Feature: domain Description: Lrp Location: 508436-508868 bp Feature: domain Description: Lrp Location: 508436-508868 bp Feature: gene Location: 509065-512079 bp Ori: KNC05913.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 509599-510124 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 509599-51 01 24 bp Feature: domain Description: nitrilase Location: 511366-512005 bp Feature: domain Description: nitrilase Location: 51 1 366-51 2005 bp Feature: gene Location: 512881-518835 bp Ori: KNC05914.1 Feature: domain Description: PL1_Passenger_AT Location: 515371-515719 bp Feature: domain Description: PL1 _Passenger_AT Location: 51 5371 -51 571 9 bp Feature: domain Description: autotrans_barl Location: 517447-518833 bp Feature: domain Description: autotrans_barl Location: 51 7447-51 8833 bp Feature: gene Location: 519116-520009 bp Ori: KNC05915.1 Feature: domain Description: PBP2_MidA_like Location: 519257-519944 bp Feature: domain Description: PBP2_MidA_like Location: 51 9257-51 9944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2000 (pfam09391), Lrp (COG1522), RVT-UG5, nitrilase (cl11424), PL1_Passenger_AT (cd01343), autotrans_barl (TIGR01414), PBP2_MidA_like (cd01004)