myRT

myRT report for GCA_001188485.1_ASM118848v1

Download annotations/find similar RTs

Seq: JNGH01000101.1 Trabulsiella odontotermitis strain 01 SAMPLE01_CONTIG_121, whole genome shotgun sequence (231966 bp)
Overview 1 RT 1: 14592-21205 bp Neighborhood of RT #1 [14592, 21267] Dabb rve_2 rve_2 RVT-GII GIIM PRK14702 PRK14849 PRK14849 Feature: gene Location: 14592-14888 bp Ori: KNC89762.1 Feature: domain Description: Dabb Location: 14598-14883 bp Feature: domain Description: Dabb Location: 1 4598-1 4883 bp Feature: gene Location: 15238-15495 bp Ori: KNC89763.1 Feature: domain Description: rve_2 Location: 15247-15313 bp Feature: domain Description: rve_2 Location: 1 5247-1 531 3 bp Feature: domain Description: rve_2 Location: 15325-15484 bp Feature: domain Description: rve_2 Location: 1 5325-1 5484 bp Feature: gene Location: 16586-17917 bp Ori: KNC89764.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16877-17543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6877-1 7543 bp Feature: domain Description: GIIM Note: maturase Location: 17609-17819 bp Feature: domain Description: GIIM Note: maturase Location: 1 7609-1 781 9 bp Feature: gene Location: 19124-19465 bp Ori: KNC89765.1 Feature: domain Description: PRK14702 Location: 19127-19370 bp Feature: domain Description: PRK1 4702 Location: 1 91 27-1 9370 bp Feature: gene Location: 19459-21267 bp Ori: KNC89766.1 Feature: domain Description: PRK14849 Location: 19576-21070 bp Feature: domain Description: PRK1 4849 Location: 1 9576-21 070 bp Feature: domain Description: PRK14849 Location: 21073-21205 bp Feature: domain Description: PRK1 4849 Location: 21 073-21 205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dabb (smart00886), rve_2 (pfam13333), RVT-GII, GIIM (pfam08388), PRK14702 (insertion element IS2 transposase InsD; Provisional), PRK14849 (autotransporter barrel domain-containing lipoprotein)

Seq: JNGH01000060.1 Trabulsiella odontotermitis strain 01 SAMPLE01_CONTIG_74, whole genome shotgun sequence (79536 bp)
Overview 1 RT 1: 38372-46777 bp Neighborhood of RT #1 [38372, 46812] ACR3 RVT-UG17 COG5519 proA Feature: gene Location: 38372-39328 bp Ori: KNC92183.1 Feature: domain Description: ACR3 Location: 38393-39317 bp Feature: domain Description: ACR3 Location: 38393-39317 bp Feature: gene Location: 41128-41358 bp Feature: gene Location: 41339-42679 bp Ori: KNC92185.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 41567-42170 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 41567-42 170 bp Feature: gene Location: 44355-45014 bp Ori: KNC92186.1 Feature: domain Description: COG5519 Location: 44511-45000 bp Feature: domain Description: COG5519 Location: 44511-45000 bp Feature: gene Location: 45559-46812 bp Ori: KNC92187.1 Feature: domain Description: proA Location: 45586-46777 bp Feature: domain Description: proA Location: 45586-46777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), RVT-UG17, COG5519 (Uncharcterized protein, DUF927 family ), proA (TIGR00407)