myRT

myRT report for GCA_001190845.1_ASM119084v1

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Seq: CP011327.1 Streptococcus agalactiae strain GX064 genome (2064350 bp)
Overview 1 RT 1: 102488-105251 bp 2 RT 2: 519925-526950 bp 3 RT 3: 534280-540482 bp 4 RT 4: 572758-580130 bp 5 RT 5: 752104-758144 bp 6 RT 6: 921089-928021 bp 7 RT 7: 1512345-1519516 bp 8 RT 8: 1564892-1573433 bp 9 RT 9: 1991092-1996872 bp Neighborhood of RT #1 [102488, 105274] RVT-GII GIIM PRK08295 PhoE Neighborhood of RT #2 [519925, 526955] murG FtsQ RVT-GII GIIM FtsA PRK09330 Neighborhood of RT #3 [534280, 540487] McsA ClpA YkuJ RVT-GII GIIM HisM GlnQ Neighborhood of RT #4 [572758, 580144] TTHA1623-like_MBL-fold PRK08643 RVT-GII GIIM PRK07246 PRK05764 Neighborhood of RT #5 [752104, 758146] Cof PRK10416 RVT-GII GIIM YcgQ YraQ Neighborhood of RT #6 [921089, 928026] PRK11856 lipoamide_DH lipoyltrans RVT-GII GIIM COG3442 MurE Neighborhood of RT #7 [1512345, 1519521] DUF4956 PolyPPase_VTC_like RVT-GII GIIM Branch_AA_trans PRK12267 Neighborhood of RT #8 [1564892, 1573435] MurC RVT-GII GIIM HepA Der Neighborhood of RT #9 [1991092, 1996880] rpmF rpmG RVT-GII GIIM Surf_Exclu_PgrA Surf_Exclu_PgrA Surf_Exclu_PgrA LPXTG_anchor Feature: gene Location: 102488-103765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102692-103307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02692-1 03307 bp Feature: domain Description: GIIM Note: maturase Location: 103361-103577 bp Feature: domain Description: GIIM Note: maturase Location: 1 03361 -1 03577 bp Feature: gene Location: 103981-104460 bp Feature: domain Description: PRK08295 Location: 103996-104221 bp Feature: domain Description: PRK08295 Location: 1 03996-1 04221 bp Feature: gene Location: 104582-105274 bp Feature: domain Description: PhoE Location: 104591-105251 bp Feature: domain Description: PhoE Location: 1 04591 -1 05251 bp Feature: gene Location: 519925-521001 bp Feature: domain Description: murG Location: 519934-520969 bp Feature: domain Description: murG Location: 51 9934-520969 bp Feature: gene Location: 521005-522132 bp Feature: domain Description: FtsQ Location: 521251-521965 bp Feature: domain Description: FtsQ Location: 521 251 -521 965 bp Feature: gene Location: 522702-523979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522906-523521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522906-523521 bp Feature: domain Description: GIIM Note: maturase Location: 523575-523791 bp Feature: domain Description: GIIM Note: maturase Location: 523575-523791 bp Feature: gene Location: 524280-525653 bp Feature: domain Description: FtsA Location: 524283-525648 bp Feature: domain Description: FtsA Location: 524283-525648 bp Feature: gene Location: 525675-526955 bp Feature: domain Description: PRK09330 Location: 525687-526950 bp Feature: domain Description: PRK09330 Location: 525687-526950 bp Feature: gene Location: 534280-536541 bp Feature: domain Description: McsA Location: 534283-534382 bp Feature: domain Description: McsA Location: 534283-534382 bp Feature: domain Description: ClpA Location: 534580-536494 bp Feature: domain Description: ClpA Location: 534580-536494 bp Feature: gene Location: 536839-537069 bp Feature: domain Description: YkuJ Location: 536845-537067 bp Feature: domain Description: YkuJ Location: 536845-537067 bp Feature: gene Location: 537619-538896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537823-538438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537823-538438 bp Feature: domain Description: GIIM Note: maturase Location: 538492-538708 bp Feature: domain Description: GIIM Note: maturase Location: 538492-538708 bp Feature: gene Location: 539068-539760 bp Feature: domain Description: HisM Location: 539077-539737 bp Feature: domain Description: HisM Location: 539077-539737 bp Feature: gene Location: 539753-540487 bp Feature: domain Description: GlnQ Location: 539768-540482 bp Feature: domain Description: GlnQ Location: 539768-540482 bp Feature: gene Location: 572758-573393 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 572794-573385 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 572794-573385 bp Feature: gene Location: 573624-574388 bp Feature: domain Description: PRK08643 Location: 573627-574386 bp Feature: domain Description: PRK08643 Location: 573627-574386 bp Feature: gene Location: 574951-576228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575155-575770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5751 55-575770 bp Feature: domain Description: GIIM Note: maturase Location: 575824-576040 bp Feature: domain Description: GIIM Note: maturase Location: 575824-576040 bp Feature: gene Location: 576358-578865 bp Feature: domain Description: PRK07246 Location: 576403-578863 bp Feature: domain Description: PRK07246 Location: 576403-578863 bp Feature: gene Location: 578951-580144 bp Feature: domain Description: PRK05764 Location: 578957-580130 bp Feature: domain Description: PRK05764 Location: 578957-5801 30 bp Feature: gene Location: 752104-752928 bp Feature: domain Description: Cof Location: 752113-752914 bp Feature: domain Description: Cof Location: 7521 1 3-75291 4 bp Feature: gene Location: 752928-754538 bp Feature: domain Description: PRK10416 Location: 753252-754527 bp Feature: domain Description: PRK1 041 6 Location: 753252-754527 bp Feature: gene Location: 755089-756366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755293-755908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755293-755908 bp Feature: domain Description: GIIM Note: maturase Location: 755962-756178 bp Feature: domain Description: GIIM Note: maturase Location: 755962-7561 78 bp Feature: gene Location: 756432-757244 bp Feature: domain Description: YcgQ Location: 756435-757242 bp Feature: domain Description: YcgQ Location: 756435-757242 bp Feature: gene Location: 757244-758146 bp Feature: domain Description: YraQ Location: 757247-758144 bp Feature: domain Description: YraQ Location: 757247-7581 44 bp Feature: gene Location: 921089-922846 bp Feature: domain Description: PRK11856 Location: 921092-921440 bp Feature: domain Description: PRK1 1 856 Location: 921 092-921 440 bp Feature: domain Description: lipoamide_DH Location: 921467-922826 bp Feature: domain Description: lipoamide_DH Location: 921 467-922826 bp Feature: gene Location: 922944-923933 bp Feature: domain Description: lipoyltrans Location: 922959-923907 bp Feature: domain Description: lipoyltrans Location: 922959-923907 bp Feature: gene Location: 924555-925832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924759-925374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924759-925374 bp Feature: domain Description: GIIM Note: maturase Location: 925428-925644 bp Feature: domain Description: GIIM Note: maturase Location: 925428-925644 bp Feature: gene Location: 925898-926683 bp Feature: domain Description: COG3442 Location: 925946-926672 bp Feature: domain Description: COG3442 Location: 925946-926672 bp Feature: gene Location: 926683-928026 bp Feature: domain Description: MurE Location: 926716-928021 bp Feature: domain Description: MurE Location: 92671 6-928021 bp Feature: gene Location: 1512345-1513022 bp Feature: domain Description: DUF4956 Location: 1512432-1512795 bp Feature: domain Description: DUF4956 Location: 1 51 2432-1 51 2795 bp Feature: gene Location: 1513074-1513769 bp Feature: domain Description: PolyPPase_VTC_like Location: 1513092-1513734 bp Feature: domain Description: PolyPPase_VTC_like Location: 1 51 3092-1 51 3734 bp Feature: gene Location: 1514138-1515415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1514342-1514957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 4342-1 51 4957 bp Feature: domain Description: GIIM Note: maturase Location: 1515011-1515227 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 501 1 -1 51 5227 bp Feature: gene Location: 1515991-1517328 bp Feature: domain Description: Branch_AA_trans Location: 1516000-1517284 bp Feature: domain Description: Branch_AA_trans Location: 1 51 6000-1 51 7284 bp Feature: gene Location: 1517524-1519521 bp Feature: domain Description: PRK12267 Location: 1517533-1519516 bp Feature: domain Description: PRK1 2267 Location: 1 51 7533-1 51 951 6 bp Feature: gene Location: 1564892-1566223 bp Feature: domain Description: MurC Location: 1564901-1566197 bp Feature: domain Description: MurC Location: 1 564901 -1 5661 97 bp Feature: gene Location: 1566233-1566850 bp Feature: gene Location: 1567022-1568299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567226-1567841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 567226-1 567841 bp Feature: domain Description: GIIM Note: maturase Location: 1567895-1568111 bp Feature: domain Description: GIIM Note: maturase Location: 1 567895-1 5681 1 1 bp Feature: gene Location: 1568872-1571970 bp Feature: domain Description: HepA Location: 1570414-1571962 bp Feature: domain Description: HepA Location: 1 57041 4-1 571 962 bp Feature: gene Location: 1572125-1573435 bp Feature: domain Description: Der Location: 1572128-1573433 bp Feature: domain Description: Der Location: 1 5721 28-1 573433 bp Feature: gene Location: 1991092-1991274 bp Feature: domain Description: rpmF Location: 1991095-1991257 bp Feature: domain Description: rpmF Location: 1 991 095-1 991 257 bp Feature: gene Location: 1991290-1991439 bp Feature: domain Description: rpmG Location: 1991293-1991437 bp Feature: domain Description: rpmG Location: 1 991 293-1 991 437 bp Feature: gene Location: 1991739-1993016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1991943-1992558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 991 943-1 992558 bp Feature: domain Description: GIIM Note: maturase Location: 1992612-1992828 bp Feature: domain Description: GIIM Note: maturase Location: 1 99261 2-1 992828 bp Feature: gene Location: 1993577-1994038 bp Feature: gene Location: 1994043-1996880 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1994145-1994520 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 9941 45-1 994520 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1994622-1994925 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 994622-1 994925 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1994997-1996206 bp Feature: domain Description: Surf_Exclu_PgrA Location: 1 994997-1 996206 bp Feature: domain Description: LPXTG_anchor Location: 1996779-1996872 bp Feature: domain Description: LPXTG_anchor Location: 1 996779-1 996872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK08295 (RNA polymerase sporulation sigma factor SigH), PhoE (COG0406), murG (TIGR01133), FtsQ (pfam03799), FtsA (smart00842), PRK09330 (cell division protein FtsZ; Validated), McsA (COG3880), ClpA (TIGR02639)
YkuJ (COG4703), HisM (COG0765), GlnQ (COG1126), TTHA1623-like_MBL-fold (cd16322), PRK08643 ((S)-acetoin forming diacetyl reductase), PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), PRK05764 (aspartate aminotransferase; Provisional), Cof (COG0561), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), YcgQ (COG3689)
YraQ (COG0701), PRK11856 (branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed), lipoamide_DH (TIGR01350), lipoyltrans (TIGR00545), COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), MurE (COG0769), DUF4956 (pfam16316), PolyPPase_VTC_like (cd07750), Branch_AA_trans (pfam05525), PRK12267 (methionyl-tRNA synthetase; Reviewed)
MurC (COG0773), HepA (COG0553), Der (COG1160), rpmF (PRK12286), rpmG (PRK00595), Surf_Exclu_PgrA (TIGR04320), LPXTG_anchor (TIGR01167)