myRT

myRT report for GCA_001192615.1_6805_1_22

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Seq: CRRO01000008.1 Streptococcus pneumoniae genome assembly 6805_1#22, scaffold ERS020540SCcontig000008, whole genome shotgun sequence (78689 bp)
Overview 1 RT 1: 24721-34890 bp Neighborhood of RT #1 [24721, 34890] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 24721-25020 bp Feature: gene Location: 25091-26434 bp Feature: domain Description: KOG1000 Location: 25370-25685 bp Feature: domain Description: KOG1 000 Location: 25370-25685 bp Feature: gene Location: 26572-28350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26833-27625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26833-27625 bp Feature: domain Description: Intron_maturas2 Location: 27730-27961 bp Feature: domain Description: Intron_maturas2 Location: 27730-27961 bp Feature: domain Description: HNHc Note: nucleases Location: 28126-28312 bp Feature: domain Description: HNHc Note: nucleases Location: 281 26-2831 2 bp Feature: gene Location: 28848-34289 bp Feature: domain Description: N6_Mtase Location: 30840-31431 bp Feature: domain Description: N6_Mtase Location: 30840-31 431 bp Feature: domain Description: COG4646 Location: 32022-34146 bp Feature: domain Description: COG4646 Location: 32022-341 46 bp Feature: gene Location: 34339-34890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )