myRT

myRT report for GCA_001201515.1_6731_4_22

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Seq: CRDS01000009.1 Streptococcus pneumoniae genome assembly 6731_4#22, scaffold ERS020588SCcontig000009, whole genome shotgun sequence (65351 bp)
Overview 1 RT 1: 43106-52536 bp Neighborhood of RT #1 [43106, 52536] N6_Mtase COG4646 SF2_C_SNF RVT-GII Intron_maturas2 Feature: gene Location: 43106-46123 bp Feature: domain Description: N6_Mtase Location: 44519-45125 bp Feature: domain Description: N6_Mtase Location: 4451 9-451 25 bp Feature: gene Location: 46065-48446 bp Feature: domain Description: COG4646 Location: 46122-48042 bp Feature: domain Description: COG4646 Location: 461 22-48042 bp Feature: domain Description: SF2_C_SNF Location: 48267-48414 bp Feature: domain Description: SF2_C_SNF Location: 48267-4841 4 bp Feature: gene Location: 49010-50821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49274-50096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49274-50096 bp Feature: domain Description: Intron_maturas2 Location: 50165-50642 bp Feature: domain Description: Intron_maturas2 Location: 501 65-50642 bp Feature: gene Location: 51948-52232 bp Feature: gene Location: 52246-52536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348)

Seq: CRDS01000014.1 Streptococcus pneumoniae genome assembly 6731_4#22, scaffold ERS020588SCcontig000014, whole genome shotgun sequence (49340 bp)
Overview 1 RT 1: 30450-36887 bp Neighborhood of RT #1 [30450, 36892] LolD SalY RVT-GII GIIM RVT-GII GlpF Feature: gene Location: 30450-31097 bp Feature: domain Description: LolD Location: 30465-31080 bp Feature: domain Description: LolD Location: 30465-31080 bp Feature: gene Location: 31110-32387 bp Feature: domain Description: SalY Location: 31275-32379 bp Feature: domain Description: SalY Location: 312 75-32 379 bp Feature: gene Location: 32899-33507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32914-33319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 914-33319 bp Feature: domain Description: GIIM Note: maturase Location: 33373-33502 bp Feature: domain Description: GIIM Note: maturase Location: 33373-33502 bp Feature: gene Location: 33492-33905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33696-33903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33696-33903 bp Feature: gene Location: 35014-35601 bp Feature: gene Location: 36188-36892 bp Feature: domain Description: GlpF Location: 36191-36887 bp Feature: domain Description: GlpF Location: 36191-36887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), SalY (COG0577), RVT-GII, GIIM (pfam08388), GlpF (COG0580)