myRT

myRT report for GCA_001206835.1_6775_2_18

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Seq: CRQA01000025.1 Streptococcus pneumoniae genome assembly 6775_2#18, scaffold ERS020368SCcontig000025, whole genome shotgun sequence (32720 bp)
Overview 1 RT 1: 16923-24041 bp Neighborhood of RT #1 [16923, 24041] COG5340 AbiEii RVT-GII cas_Csn1 Phage_lysozyme2 PRK08581 Feature: gene Location: 16923-17513 bp Feature: domain Description: COG5340 Location: 16926-17358 bp Feature: domain Description: COG5340 Location: 1 6926-1 7358 bp Feature: gene Location: 17510-18355 bp Feature: domain Description: AbiEii Location: 17609-18308 bp Feature: domain Description: AbiEii Location: 1 7609-1 8308 bp Feature: gene Location: 18705-20627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19032-19767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9032-1 9767 bp Feature: domain Description: cas_Csn1 Location: 20178-20457 bp Feature: domain Description: cas_Csn1 Location: 201 78-20457 bp Feature: gene Location: 21336-23072 bp Feature: domain Description: Phage_lysozyme2 Location: 22176-22689 bp Feature: domain Description: Phage_lysozyme2 Location: 221 76-22689 bp Feature: domain Description: PRK08581 Location: 22806-23055 bp Feature: domain Description: PRK08581 Location: 22806-23055 bp Feature: gene Location: 23184-24041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)