myRT

myRT report for GCA_001207335.1_6755_2_13

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Seq: CRLY01000020.1 Streptococcus pneumoniae genome assembly 6755_2#13, scaffold ERS020315SCcontig000020, whole genome shotgun sequence (42027 bp)
Overview 1 RT 1: 32513-39822 bp Neighborhood of RT #1 [32513, 39824] EriC TrkA_C xerS RVT-GII GIIM LuxS COG4868 Feature: gene Location: 32513-34063 bp Feature: domain Description: EriC Location: 32606-33818 bp Feature: domain Description: EriC Location: 32606-3381 8 bp Feature: domain Description: TrkA_C Location: 33863-34058 bp Feature: domain Description: TrkA_C Location: 33863-34058 bp Feature: gene Location: 34647-35717 bp Feature: domain Description: xerS Location: 34650-35715 bp Feature: domain Description: xerS Location: 34650-3571 5 bp Feature: gene Location: 36419-37597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36623-37238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36623-37238 bp Feature: domain Description: GIIM Note: maturase Location: 37292-37505 bp Feature: domain Description: GIIM Note: maturase Location: 37292-37505 bp Feature: gene Location: 37763-38245 bp Feature: domain Description: LuxS Location: 37781-38240 bp Feature: domain Description: LuxS Location: 37781 -38240 bp Feature: gene Location: 38340-39824 bp Feature: domain Description: COG4868 Location: 38346-39822 bp Feature: domain Description: COG4868 Location: 38346-39822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EriC (cd01031), TrkA_C (pfam02080), xerS (PRK05084), RVT-GII, GIIM (pfam08388), LuxS (pfam02664), COG4868 (Uncharacterized protein, UPF0371 family )

Seq: CRLY01000022.1 Streptococcus pneumoniae genome assembly 6755_2#13, scaffold ERS020315SCcontig000022, whole genome shotgun sequence (36736 bp)
Overview 1 RT 1: 13670-20701 bp Neighborhood of RT #1 [13670, 20718] COG5340 AbiEii RVT-GII KOG4768 cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 Feature: gene Location: 13670-14260 bp Feature: domain Description: COG5340 Location: 13673-14105 bp Feature: domain Description: COG5340 Location: 13673-14105 bp Feature: gene Location: 14257-15102 bp Feature: domain Description: AbiEii Location: 14356-15055 bp Feature: domain Description: AbiEii Location: 14356-15055 bp Feature: gene Location: 15452-17005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15455-16145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15455-16145 bp Feature: domain Description: KOG4768 Location: 16292-16397 bp Feature: domain Description: KOG4768 Location: 162 92 -16397 bp Feature: domain Description: cas_Csn1 Location: 16556-16835 bp Feature: domain Description: cas_Csn1 Location: 16556-16835 bp Feature: gene Location: 17158-17331 bp Feature: gene Location: 18040-20718 bp Feature: domain Description: Peptidase_M23 Location: 19486-19690 bp Feature: domain Description: Peptidase_M2 3 Location: 19486-19690 bp Feature: domain Description: Phage_lysozyme2 Location: 19843-20350 bp Feature: domain Description: Phage_lysozyme2 Location: 19843-2 0350 bp Feature: domain Description: COG3942 Location: 20470-20701 bp Feature: domain Description: COG3942 Location: 2 0470-2 0701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen )