myRT

myRT report for GCA_001208045.1_6755_6_1

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Seq: CROP01000013.1 Streptococcus pneumoniae genome assembly 6755_6#1, scaffold ERS020687SCcontig000013, whole genome shotgun sequence (61785 bp)
Overview 1 RT 1: 46692-54605 bp Neighborhood of RT #1 [46692, 54610] PRK04813 MFS_MefA_like RVT-GII GIIM GlpF Feature: gene Location: 46692-48242 bp Feature: domain Description: PRK04813 Location: 46710-48237 bp Feature: domain Description: PRK0481 3 Location: 4671 0-48237 bp Feature: gene Location: 48708-49886 bp Feature: domain Description: MFS_MefA_like Location: 48723-49866 bp Feature: domain Description: MFS_MefA_like Location: 48723-49866 bp Feature: gene Location: 50346-51623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50550-51165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50550-51 1 65 bp Feature: domain Description: GIIM Note: maturase Location: 51219-51432 bp Feature: domain Description: GIIM Note: maturase Location: 51 21 9-51 432 bp Feature: gene Location: 52660-53319 bp Feature: gene Location: 53906-54610 bp Feature: domain Description: GlpF Location: 53909-54605 bp Feature: domain Description: GlpF Location: 53909-54605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388), GlpF (COG0580)

Seq: CROP01000010.1 Streptococcus pneumoniae genome assembly 6755_6#1, scaffold ERS020687SCcontig000010, whole genome shotgun sequence (66420 bp)
Overview 1 RT 1: 18384-27641 bp Neighborhood of RT #1 [18384, 27823] COG5340 AbiEii RVT-GII KOG4768 cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 18384-18974 bp Feature: domain Description: COG5340 Location: 18387-18819 bp Feature: domain Description: COG5340 Location: 18387-18819 bp Feature: gene Location: 18971-19816 bp Feature: domain Description: AbiEii Location: 19070-19769 bp Feature: domain Description: AbiEii Location: 19070-19769 bp Feature: gene Location: 20166-22088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20493-21228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0493-2 12 2 8 bp Feature: domain Description: KOG4768 Location: 21375-21480 bp Feature: domain Description: KOG4768 Location: 2 1375-2 1480 bp Feature: domain Description: cas_Csn1 Location: 21636-21918 bp Feature: domain Description: cas_Csn1 Location: 2 1636-2 1918 bp Feature: gene Location: 22797-25475 bp Feature: domain Description: Peptidase_M23 Location: 24243-24447 bp Feature: domain Description: Peptidase_M2 3 Location: 2 42 43-2 4447 bp Feature: domain Description: Phage_lysozyme2 Location: 24600-25110 bp Feature: domain Description: Phage_lysozyme2 Location: 2 4600-2 5110 bp Feature: domain Description: COG3942 Location: 25185-25458 bp Feature: domain Description: COG3942 Location: 2 5185-2 5458 bp Feature: gene Location: 25472-27823 bp Feature: domain Description: TraC-F-type Location: 26258-27641 bp Feature: domain Description: TraC-F-type Location: 2 62 58-2 7641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)