myRT

myRT report for GCA_001210085.1_6710_7_3

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Seq: CQVI01000009.1 Streptococcus pneumoniae genome assembly 6710_7#3, scaffold ERS020881SCcontig000009, whole genome shotgun sequence (52232 bp)
Overview 1 RT 1: 32163-41740 bp Neighborhood of RT #1 [32163, 41778] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 32163-34514 bp Feature: domain Description: TraC-F-type Location: 32652-34338 bp Feature: domain Description: TraC-F-type Location: 32652-34338 bp Feature: gene Location: 34516-37209 bp Feature: domain Description: PRK06149 Location: 35941-36202 bp Feature: domain Description: PRK061 49 Location: 35941 -36202 bp Feature: domain Description: Phage_lysozyme2 Location: 36313-36823 bp Feature: domain Description: Phage_lysozyme2 Location: 3631 3-36823 bp Feature: domain Description: PRK08581 Location: 36943-37192 bp Feature: domain Description: PRK08581 Location: 36943-371 92 bp Feature: gene Location: 37918-39840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38245-38980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38245-38980 bp Feature: domain Description: KOG4768 Location: 39127-39232 bp Feature: domain Description: KOG4768 Location: 391 27-39232 bp Feature: domain Description: cas_Csn1 Location: 39391-39670 bp Feature: domain Description: cas_Csn1 Location: 39391 -39670 bp Feature: gene Location: 40175-40777 bp Feature: domain Description: AbiEi_3_N Location: 40193-40487 bp Feature: domain Description: AbiEi_3_N Location: 401 93-40487 bp Feature: gene Location: 40780-41778 bp Feature: domain Description: AbiEii Location: 40909-41740 bp Feature: domain Description: AbiEii Location: 40909-41 740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)

Seq: CQVI01000074.1 Streptococcus pneumoniae genome assembly 6710_7#3, scaffold ERS020881SCcontig000074, whole genome shotgun sequence (2204 bp)
Overview 1 RT 1: 915-2001 bp Neighborhood of RT #1 [915, 2192] RVT-GII GIIM Feature: gene Location: 915-2192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119-1734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119-1734 bp Feature: domain Description: GIIM Note: maturase Location: 1788-2001 bp Feature: domain Description: GIIM Note: maturase Location: 1788-2 001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)