myRT

myRT report for GCA_001213005.1_7396_6_51

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Seq: CSTU01000022.1 Mycobacterium abscessus genome assembly 7396_6#51, scaffold ERS075494SCcontig000022, whole genome shotgun sequence (83342 bp)
Overview 1 RT 1: 129-4157 bp Neighborhood of RT #1 [129, 4324] RVT-UG28 ACH1 DUF3060 Feature: gene Location: 129-1658 bp Ori: CPR97354.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 411-1095 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 41 1 -1 095 bp Feature: gene Location: 2373-3695 bp Ori: CPR97367.1 Gene: scpC Feature: domain Description: ACH1 Location: 2391-3678 bp Feature: domain Description: ACH1 Location: 2391 -3678 bp Feature: gene Location: 3698-4324 bp Ori: CPR97380.1 Feature: domain Description: DUF3060 Location: 4079-4157 bp Feature: domain Description: DUF3060 Location: 4079-41 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, ACH1 (COG0427), DUF3060 (pfam11259)

Seq: CSTU01000063.1 Mycobacterium abscessus genome assembly 7396_6#51, scaffold ERS075494SCcontig000063, whole genome shotgun sequence (18673 bp)
Overview 1 RT 1: 5312-8858 bp Neighborhood of RT #1 [5312, 8950] PRK02866 RVT-GII GIIM Transposase_mut IS285 Feature: gene Location: 5312-5767 bp Ori: CPS23851.1 Gene: cynS_3 Feature: domain Description: PRK02866 Location: 5330-5765 bp Feature: domain Description: PRK02 866 Location: 5330-5765 bp Feature: gene Location: 6120-6362 bp Feature: gene Location: 6392-7603 bp Ori: CPS23874.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6473-7169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6473-7169 bp Feature: domain Description: GIIM Note: maturase Location: 7241-7466 bp Feature: domain Description: GIIM Note: maturase Location: 72 41-7466 bp Feature: gene Location: 7546-8433 bp Ori: CPS23888.1 Feature: domain Description: Transposase_mut Location: 7549-8224 bp Feature: domain Description: Transposase_mut Location: 7549-82 2 4 bp Feature: gene Location: 8402-8950 bp Ori: CPS23900.1 Feature: domain Description: IS285 Location: 8483-8858 bp Feature: domain Description: IS2 85 Location: 8483-8858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02866 (cyanate hydratase; Validated), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), IS285 (COG3328)