myRT

myRT report for GCA_001213085.1_7396_7_18

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Seq: CSVS01000136.1 Mycobacterium abscessus genome assembly 7396_7#18, scaffold ERS075557SCcontig000136, whole genome shotgun sequence (10900 bp)
Overview 1 RT 1: 2002-5991 bp Neighborhood of RT #1 [2002, 6044] VanZ LMWPTP RVT-UG28 TMR_SDR_a Feature: gene Location: 2002-2757 bp Ori: CPU62086.1 Feature: domain Description: VanZ Location: 2287-2632 bp Feature: domain Description: VanZ Location: 2287-2632 bp Feature: gene Location: 2740-3261 bp Ori: CPU62090.1 Gene: ptpA_3 Feature: domain Description: LMWPTP Location: 2773-3232 bp Feature: domain Description: LMWPTP Location: 2773-3232 bp Feature: gene Location: 3272-4819 bp Ori: CPU62096.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 3551-4232 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 3551 -4232 bp Feature: gene Location: 5101-5346 bp Feature: gene Location: 5469-6044 bp Ori: CPU62101.1 Gene: azoB_2 Feature: domain Description: TMR_SDR_a Location: 5472-5991 bp Feature: domain Description: TMR_SDR_a Location: 5472-5991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VanZ (pfam04892), LMWPTP (cd16343), RVT-UG28, TMR_SDR_a (cd05269)

Seq: CSVS01000781.1 Mycobacterium abscessus genome assembly 7396_7#18, scaffold ERS075557SCcontig000781, whole genome shotgun sequence (2250 bp)
Overview 1 RT 1: 22-1475 bp Neighborhood of RT #1 [22, 2206] dcd RVT-UG22 Feature: gene Location: 22-597 bp Ori: CPU66575.1 Gene: dcd_2 Feature: domain Description: dcd Location: 28-565 bp Feature: domain Description: dcd Location: 2 8-565 bp Feature: gene Location: 708-1298 bp Feature: gene Location: 1295-2206 bp Ori: CPU66577.1 Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 1298-1475 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 12 98-1475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dcd (PRK00416), RVT-UG22