myRT

myRT report for GCA_001214985.1_7396_7_23

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Seq: CSVY01000064.1 Mycobacterium abscessus genome assembly 7396_7#23, scaffold ERS075562SCcontig000064, whole genome shotgun sequence (18680 bp)
Overview 1 RT 1: 5312-8858 bp Neighborhood of RT #1 [5312, 8950] PRK02866 RVT-GII GIIM Transposase_mut IS285 Feature: gene Location: 5312-5767 bp Ori: CPV09448.1 Gene: cynS_3 Feature: domain Description: PRK02866 Location: 5330-5765 bp Feature: domain Description: PRK02866 Location: 5330-5765 bp Feature: gene Location: 6138-6362 bp Feature: gene Location: 6392-7603 bp Ori: CPV09464.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6473-7169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6473-71 69 bp Feature: domain Description: GIIM Note: maturase Location: 7241-7466 bp Feature: domain Description: GIIM Note: maturase Location: 7241 -7466 bp Feature: gene Location: 7546-8433 bp Ori: CPV09473.1 Feature: domain Description: Transposase_mut Location: 7549-8224 bp Feature: domain Description: Transposase_mut Location: 7549-8224 bp Feature: gene Location: 8402-8950 bp Ori: CPV09479.1 Feature: domain Description: IS285 Location: 8483-8858 bp Feature: domain Description: IS285 Location: 8483-8858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02866 (cyanate hydratase; Validated), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), IS285 (COG3328)

Seq: CSVY01000023.1 Mycobacterium abscessus genome assembly 7396_7#23, scaffold ERS075562SCcontig000023, whole genome shotgun sequence (83365 bp)
Overview 1 RT 1: 79396-82674 bp Neighborhood of RT #1 [79396, 83237] DUF3060 ACH1 RVT-UG28 Feature: gene Location: 79396-79668 bp Ori: CPU91810.1 Feature: domain Description: DUF3060 Location: 79423-79501 bp Feature: domain Description: DUF3060 Location: 7942 3-79501 bp Feature: gene Location: 79671-80993 bp Ori: CPU91818.1 Gene: scpC Feature: domain Description: ACH1 Location: 79689-80976 bp Feature: domain Description: ACH1 Location: 79689-80976 bp Feature: gene Location: 81708-83237 bp Ori: CPU91828.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 81990-82674 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 81990-82 674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3060 (pfam11259), ACH1 (COG0427), RVT-UG28