myRT

myRT report for GCA_001217505.1_6406_4_20

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Seq: CTBL01000099.1 Chlamydia trachomatis genome assembly 6406_4#20, scaffold ERS177788SCcontig000099, whole genome shotgun sequence (12274 bp)
Overview 1 RT 1: 8188-11257 bp Neighborhood of RT #1 [8188, 11934] ParE_toxin COG2865 RVT-UG15 RVT-UG15 Feature: gene Location: 8188-8511 bp Ori: CQB87010.1 Feature: domain Description: ParE_toxin Location: 8206-8473 bp Feature: domain Description: ParE_toxin Location: 8206-8473 bp Feature: gene Location: 8980-10395 bp Ori: CQB87011.1 Feature: domain Description: COG2865 Location: 8983-10390 bp Feature: domain Description: COG2865 Location: 8983-1 0390 bp Feature: gene Location: 10429-10986 bp Ori: CQB87012.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 10858-10981 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 0858-1 0981 bp Feature: gene Location: 11122-11934 bp Ori: CQB87013.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 11128-11257 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 1 1 28-1 1 257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG15

Seq: CTBL01000121.1 Chlamydia trachomatis genome assembly 6406_4#20, scaffold ERS177788SCcontig000121, whole genome shotgun sequence (10380 bp)
Overview 1 RT 1: 4974-10338 bp Neighborhood of RT #1 [4974, 10370] DUF4972 ZnMc_astacin_like RVT-GII GIIM HTH_17 Feature: gene Location: 4974-5282 bp Feature: gene Location: 5293-6378 bp Ori: CQB87227.1 Feature: domain Description: DUF4972 Location: 5296-5491 bp Feature: domain Description: DUF4972 Location: 52 96-5491 bp Feature: domain Description: ZnMc_astacin_like Location: 5689-6202 bp Feature: domain Description: ZnMc_astacin_like Location: 5689-62 02 bp Feature: gene Location: 6562-7956 bp Ori: CQB87228.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6892-7510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6892 -7510 bp Feature: domain Description: GIIM Note: maturase Location: 7564-7774 bp Feature: domain Description: GIIM Note: maturase Location: 7564-7774 bp Feature: gene Location: 9405-9824 bp Feature: gene Location: 10170-10370 bp Ori: CQB87230.1 Feature: domain Description: HTH_17 Location: 10191-10338 bp Feature: domain Description: HTH_17 Location: 10191-10338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4972 (pfam16342), ZnMc_astacin_like (cd04280), RVT-GII, GIIM (pfam08388), HTH_17 (pfam12728)