myRT

myRT report for GCA_001217745.1_4976_6_4

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Seq: CTIT01000003.1 Yersinia enterocolitica genome assembly 4976_6#4, scaffold ERS008631SCcontig000003, whole genome shotgun sequence (538696 bp)
Overview 1 RT 1: 409892-415558 bp Neighborhood of RT #1 [409892, 415558] P Q RVT-Retrons HicB Feature: gene Location: 409892-411589 bp Feature: domain Description: P Location: 409895-411557 bp Feature: domain Description: P Location: 409895-41 1 557 bp Feature: gene Location: 411586-412599 bp Feature: domain Description: Q Location: 411589-412594 bp Feature: domain Description: Q Location: 41 1 589-41 2594 bp Feature: gene Location: 412723-414525 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 412909-413554 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 2909-41 3554 bp Feature: gene Location: 414778-415044 bp Feature: domain Description: HicB Location: 414790-414943 bp Feature: domain Description: HicB Location: 41 4790-41 4943 bp Feature: gene Location: 415364-415558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, HicB (pfam05534)

Seq: CTIT01000002.1 Yersinia enterocolitica genome assembly 4976_6#4, scaffold ERS008631SCcontig000002, whole genome shotgun sequence (666296 bp)
Overview 1 RT 1: 412470-418494 bp Neighborhood of RT #1 [412470, 418568] PAS_4 HTH_LUXR Acetyltransf_1 RVT_N RVT-GII MPP_PA3087 YeeA Feature: gene Location: 412470-413159 bp Feature: domain Description: PAS_4 Location: 412530-412839 bp Feature: domain Description: PAS_4 Location: 412 530-412 839 bp Feature: domain Description: HTH_LUXR Location: 412929-413079 bp Feature: domain Description: HTH_LUXR Location: 412 92 9-413079 bp Feature: gene Location: 413185-413595 bp Feature: domain Description: Acetyltransf_1 Location: 413278-413527 bp Feature: domain Description: Acetyltransf_1 Location: 4132 78-41352 7 bp Feature: gene Location: 414384-415061 bp Feature: RT Description: RVT_N Location: 414438-414681 bp Feature: RT Description: RVT_N Location: 414438-414681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414726-415053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41472 6-415053 bp Feature: gene Location: 415108-415950 bp Feature: domain Description: MPP_PA3087 Location: 415120-415939 bp Feature: domain Description: MPP_PA3087 Location: 41512 0-415939 bp Feature: gene Location: 415992-418568 bp Feature: domain Description: YeeA Location: 415998-418494 bp Feature: domain Description: YeeA Location: 415998-418494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAS_4 (pfam08448), HTH_LUXR (smart00421), Acetyltransf_1 (pfam00583), RVT_N (pfam13655), RVT-GII, MPP_PA3087 (cd07413), YeeA (COG1002)