myRT

myRT report for GCA_001218905.1_5116_2_2

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Seq: CTIP01000008.1 Yersinia enterocolitica genome assembly 5116_2#2, scaffold ERS008571SCcontig000008, whole genome shotgun sequence (250485 bp)
Overview 1 RT 1: 20638-25117 bp Neighborhood of RT #1 [20638, 25131] HTH_Tnp_1 Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-Retrons INT_Lambda_C Feature: gene Location: 20638-21039 bp Ori: CQH31727.1 Feature: domain Description: HTH_Tnp_1 Location: 20767-20860 bp Feature: domain Description: HTH_Tnp_1 Location: 20767-20860 bp Feature: gene Location: 21153-22013 bp Ori: CQH31738.1 Feature: domain Description: Phage_CI_repr Location: 21186-21363 bp Feature: domain Description: Phage_CI_repr Location: 21 1 86-21 363 bp Feature: domain Description: Phage_CI_repr Location: 21456-21645 bp Feature: domain Description: Phage_CI_repr Location: 21 456-21 645 bp Feature: domain Description: Phage_CI_C Location: 21696-21987 bp Feature: domain Description: Phage_CI_C Location: 21 696-21 987 bp Feature: gene Location: 22060-22992 bp Ori: CQH31748.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22216-22771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2221 6-22771 bp Feature: gene Location: 23335-24213 bp Feature: gene Location: 24574-25131 bp Ori: CQH31766.1 Gene: int_1 Feature: domain Description: INT_Lambda_C Location: 24607-25117 bp Feature: domain Description: INT_Lambda_C Location: 24607-251 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), RVT-Retrons, INT_Lambda_C (cd00800)