myRT

myRT report for GCA_001219245.1_4976_6_2

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Seq: CTQV01000064.1 Yersinia enterocolitica genome assembly 4976_6#2, scaffold ERS008629SCcontig000064, whole genome shotgun sequence (16361 bp)
Overview 1 RT 1: 9497-16191 bp Neighborhood of RT #1 [9497, 16217] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 9497-9772 bp Ori: CQR06729.1 Feature: domain Description: TraD Location: 9575-9752 bp Feature: domain Description: TraD Location: 9575-9752 bp Feature: gene Location: 9960-11276 bp Ori: CQR06741.1 Feature: domain Description: Shufflon_N Location: 10104-11040 bp Feature: domain Description: Shufflon_N Location: 1 01 04-1 1 040 bp Feature: gene Location: 11942-12313 bp Ori: CQR06755.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12080-12311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2080-1 231 1 bp Feature: gene Location: 12477-13664 bp Ori: CQR06769.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12480-12705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2480-1 2705 bp Feature: gene Location: 13817-14917 bp Feature: gene Location: 14997-16217 bp Ori: CQR06799.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 15009-16191 bp Feature: domain Description: PRK09692 Location: 1 5009-1 61 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)