myRT

myRT report for GCA_001219325.1_4976_1_7

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Seq: CTJL01000078.1 Yersinia enterocolitica genome assembly 4976_1#7, scaffold ERS008598SCcontig000078, whole genome shotgun sequence (16038 bp)
Overview 1 RT 1: 10169-15912 bp Neighborhood of RT #1 [10169, 15938] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 10169-10444 bp Ori: CQI17965.1 Feature: domain Description: TraD Location: 10247-10424 bp Feature: domain Description: TraD Location: 1 0247-1 0424 bp Feature: gene Location: 10632-11948 bp Ori: CQI17982.1 Feature: domain Description: Shufflon_N Location: 10776-11712 bp Feature: domain Description: Shufflon_N Location: 1 0776-1 1 71 2 bp Feature: gene Location: 12614-12985 bp Ori: CQI17999.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12752-12983 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2752-1 2983 bp Feature: gene Location: 13149-14336 bp Ori: CQI18010.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13152-13377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 31 52-1 3377 bp Feature: gene Location: 14489-15589 bp Feature: gene Location: 15669-15938 bp Ori: CQI18043.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 15672-15912 bp Feature: domain Description: PRK09692 Location: 1 5672-1 591 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)