myRT

myRT report for GCA_001220085.1_8016_2_67

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Seq: CTFQ01000009.1 Yersinia enterocolitica genome assembly 8016_2#67, scaffold ERS137943SCcontig000009, whole genome shotgun sequence (115075 bp)
Overview 1 RT 1: 13287-19990 bp Neighborhood of RT #1 [13287, 20016] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 13287-13562 bp Ori: CQD64045.1 Feature: domain Description: TraD Location: 13365-13542 bp Feature: domain Description: TraD Location: 1 3365-1 3542 bp Feature: gene Location: 13750-15066 bp Ori: CQD64048.1 Feature: domain Description: Shufflon_N Location: 13894-14830 bp Feature: domain Description: Shufflon_N Location: 1 3894-1 4830 bp Feature: gene Location: 15732-16103 bp Ori: CQD64050.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15870-16101 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5870-1 61 01 bp Feature: gene Location: 16267-17454 bp Ori: CQD64052.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16270-16495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6270-1 6495 bp Feature: gene Location: 17607-18707 bp Feature: gene Location: 18787-20016 bp Ori: CQD64059.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 18790-19990 bp Feature: domain Description: PRK09692 Location: 1 8790-1 9990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)