myRT

myRT report for GCA_001220185.1_4976_1_11

Download annotations/find similar RTs

Seq: CTJI01000008.1 Yersinia enterocolitica genome assembly 4976_1#11, scaffold ERS008602SCcontig000008, whole genome shotgun sequence (117925 bp)
Overview 1 RT 1: 16226-22929 bp Neighborhood of RT #1 [16226, 22955] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 16226-16501 bp Ori: CQH80740.1 Feature: domain Description: TraD Location: 16304-16481 bp Feature: domain Description: TraD Location: 1 6304-1 6481 bp Feature: gene Location: 16689-18005 bp Ori: CQH80748.1 Feature: domain Description: Shufflon_N Location: 16833-17769 bp Feature: domain Description: Shufflon_N Location: 1 6833-1 7769 bp Feature: gene Location: 18671-19042 bp Ori: CQH80757.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18809-19040 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8809-1 9040 bp Feature: gene Location: 19206-20393 bp Ori: CQH80765.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19209-19434 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9209-1 9434 bp Feature: gene Location: 20546-21646 bp Feature: gene Location: 21726-22955 bp Ori: CQH80783.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 21729-22929 bp Feature: domain Description: PRK09692 Location: 21 729-22929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)