myRT

myRT report for GCA_001221085.1_5116_2_5

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Seq: CTKS01000064.1 Yersinia enterocolitica genome assembly 5116_2#5, scaffold ERS008579SCcontig000064, whole genome shotgun sequence (16414 bp)
Overview 1 RT 1: 13-5726 bp Neighborhood of RT #1 [13, 5746] PRK09692 RVT-Retrons RVT-Retrons Shufflon_N TraD Feature: gene Location: 13-246 bp Ori: CQJ48773.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 19-220 bp Feature: domain Description: PRK09692 Location: 1 9-220 bp Feature: gene Location: 326-1426 bp Feature: gene Location: 1579-2766 bp Ori: CQJ48782.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1582-1807 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 582-1 807 bp Feature: gene Location: 2930-3301 bp Ori: CQJ48784.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3068-3299 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3068-3299 bp Feature: gene Location: 3967-5283 bp Ori: CQJ48789.1 Feature: domain Description: Shufflon_N Location: 4111-5047 bp Feature: domain Description: Shufflon_N Location: 41 1 1 -5047 bp Feature: gene Location: 5471-5746 bp Ori: CQJ48792.1 Feature: domain Description: TraD Location: 5549-5726 bp Feature: domain Description: TraD Location: 5549-5726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Shufflon_N (pfam04917), TraD (pfam06412)