myRT

myRT report for GCA_001222105.1_5116_2_1

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Seq: CTRD01000062.1 Yersinia enterocolitica genome assembly 5116_2#1, scaffold ERS008570SCcontig000062, whole genome shotgun sequence (16384 bp)
Overview 1 RT 1: 10-5885 bp Neighborhood of RT #1 [10, 5905] PRK09692 RVT-Retrons RVT-Retrons Shufflon_N TraD Feature: gene Location: 10-405 bp Ori: CQR13924.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 13-379 bp Feature: domain Description: PRK09692 Location: 1 3-379 bp Feature: gene Location: 485-1585 bp Feature: gene Location: 1738-2925 bp Ori: CQR13948.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1741-1966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 741 -1 966 bp Feature: gene Location: 3089-3460 bp Ori: CQR13958.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3227-3458 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3227-3458 bp Feature: gene Location: 4126-5442 bp Ori: CQR13966.1 Feature: domain Description: Shufflon_N Location: 4270-5206 bp Feature: domain Description: Shufflon_N Location: 4270-5206 bp Feature: gene Location: 5630-5905 bp Ori: CQR13975.1 Feature: domain Description: TraD Location: 5708-5885 bp Feature: domain Description: TraD Location: 5708-5885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Shufflon_N (pfam04917), TraD (pfam06412)