myRT

myRT report for GCA_001223005.1_4976_2_11

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Seq: CTRE01000024.1 Yersinia enterocolitica genome assembly 4976_2#11, scaffold ERS008614SCcontig000024, whole genome shotgun sequence (11038 bp)
Overview 1 RT 1: 4858-10880 bp Neighborhood of RT #1 [4858, 10906] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 4858-5133 bp Ori: CQQ71175.1 Feature: domain Description: TraD Location: 4936-5113 bp Feature: domain Description: TraD Location: 4936-51 1 3 bp Feature: gene Location: 5321-6637 bp Ori: CQQ71201.1 Feature: domain Description: Shufflon_N Location: 5465-6401 bp Feature: domain Description: Shufflon_N Location: 5465-6401 bp Feature: gene Location: 7303-7674 bp Ori: CQQ71243.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7441-7672 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7441 -7672 bp Feature: gene Location: 7838-9025 bp Ori: CQQ71264.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7841-8066 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7841 -8066 bp Feature: gene Location: 9178-10278 bp Feature: gene Location: 10358-10906 bp Ori: CQQ71300.1 Gene: intA Feature: domain Description: PRK09692 Location: 10361-10880 bp Feature: domain Description: PRK09692 Location: 1 0361 -1 0880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)