myRT

myRT report for GCA_001230465.1_5364_3_3

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Seq: CTZB01000047.1 Staphylococcus aureus genome assembly 5364_3#3, scaffold ERS010886.5364_3_3.47, whole genome shotgun sequence (54754 bp)
Overview 1 RT 1: 29653-35244 bp Neighborhood of RT #1 [29653, 35244] RVT-G2L4 COG0610 Feature: gene Location: 29653-29916 bp Feature: gene Location: 30014-30169 bp Feature: gene Location: 30192-31526 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 30429-31068 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 30429-31 068 bp Feature: gene Location: 31667-34864 bp Feature: domain Description: COG0610 Location: 31730-34766 bp Feature: domain Description: COG061 0 Location: 31 730-34766 bp Feature: gene Location: 35107-35244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )

Seq: CTZB01000089.1 Staphylococcus aureus genome assembly 5364_3#3, scaffold ERS010886.5364_3_3.89, whole genome shotgun sequence (30532 bp)
Overview 1 RT 1: 3044-6320 bp Neighborhood of RT #1 [3044, 6421] GntR RVT-GII GIIM DDE_3 Feature: gene Location: 3044-3790 bp Feature: domain Description: GntR Location: 3158-3779 bp Feature: domain Description: GntR Location: 3158-3779 bp Feature: gene Location: 4138-4314 bp Feature: gene Location: 4837-5385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4843-4936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4843-4936 bp Feature: domain Description: GIIM Note: maturase Location: 5011-5233 bp Feature: domain Description: GIIM Note: maturase Location: 5011-52 33 bp Feature: gene Location: 5868-6134 bp Feature: gene Location: 6146-6421 bp Feature: domain Description: DDE_3 Location: 6149-6320 bp Feature: domain Description: DDE_3 Location: 6149-632 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GntR (pfam00392), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: CTZB01000295.1 Staphylococcus aureus genome assembly 5364_3#3, scaffold ERS010886.5364_3_3.295, whole genome shotgun sequence (1929 bp)
Overview 1 RT 1: 77-1927 bp Neighborhood of RT #1 [77, 1927] RVT-GII Feature: gene Location: 77-1552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1175 bp Feature: gene Location: 1655-1927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII