myRT

myRT report for GCA_001238265.1_Salmonella_enterica_CVM_N43448_v1.0

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Seq: LHDM01000009.1 Salmonella enterica subsp. enterica serovar Kentucky strain CVM N43448 N43448_contig_9, whole genome shotgun sequence (38112 bp)
Overview 1 RT 1: 27912-32347 bp Neighborhood of RT #1 [27912, 32352] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 27912-28103 bp Feature: gene Location: 28294-28752 bp Feature: gene Location: 29525-31426 bp Ori: KNH67031.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29792-30623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29792-30623 bp Feature: domain Description: Intron_maturas2 Location: 30737-30995 bp Feature: domain Description: Intron_maturas2 Location: 30737-30995 bp Feature: domain Description: HNHc Note: nucleases Location: 31169-31331 bp Feature: domain Description: HNHc Note: nucleases Location: 31 1 69-31 331 bp Feature: gene Location: 31576-32061 bp Ori: KNH67032.1 Feature: domain Description: PRK13732 Location: 31579-32059 bp Feature: domain Description: PRK1 3732 Location: 31 579-32059 bp Feature: gene Location: 32119-32352 bp Ori: KNH67033.1 Feature: domain Description: DUF905 Location: 32149-32347 bp Feature: domain Description: DUF905 Location: 321 49-32347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: LHDM01000013.1 Salmonella enterica subsp. enterica serovar Kentucky strain CVM N43448 N43448_contig_13, whole genome shotgun sequence (171125 bp)
Overview 1 RT 1: 1659-8025 bp Neighborhood of RT #1 [1659, 8036] RVT-UG5 nitrilase PRK09692 CAD1 Feature: gene Location: 1659-2348 bp Feature: gene Location: 2345-5230 bp Ori: KNH66570.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2822-3353 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 82 2 -3353 bp Feature: domain Description: nitrilase Location: 4529-5156 bp Feature: domain Description: nitrilase Location: 452 9-5156 bp Feature: gene Location: 5296-6546 bp Ori: KNH66571.1 Feature: domain Description: PRK09692 Location: 5305-6505 bp Feature: domain Description: PRK09692 Location: 5305-6505 bp Feature: gene Location: 7017-8036 bp Ori: KNH66572.1 Feature: domain Description: CAD1 Location: 7035-8025 bp Feature: domain Description: CAD1 Location: 7035-802 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional), CAD1 (cd05283)