myRT

myRT report for GCA_001238705.1_5364_3_10

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Seq: CTZA01000369.1 Staphylococcus aureus genome assembly 5364_3#10, scaffold ERS010893.5364_3_10.369, whole genome shotgun sequence (6002 bp)
Overview 1 RT 1: 2999-5999 bp Neighborhood of RT #1 [2999, 5999] GntR RVT-GII GIIM Feature: gene Location: 2999-3745 bp Feature: domain Description: GntR Location: 3113-3734 bp Feature: domain Description: GntR Location: 31 1 3-3734 bp Feature: gene Location: 4037-4255 bp Feature: gene Location: 4804-5352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4810-4903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 0-4903 bp Feature: domain Description: GIIM Note: maturase Location: 4978-5200 bp Feature: domain Description: GIIM Note: maturase Location: 4978-5200 bp Feature: gene Location: 5835-5999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GntR (pfam00392), RVT-GII, GIIM (pfam08388)

Seq: CTZA01000626.1 Staphylococcus aureus genome assembly 5364_3#10, scaffold ERS010893.5364_3_10.626, whole genome shotgun sequence (2561 bp)
Overview 1 RT 1: 1-2559 bp Neighborhood of RT #1 [1, 2559] DUF3387 RVT-G2L4 Feature: gene Location: 1-912 bp Feature: domain Description: DUF3387 Location: 10-892 bp Feature: domain Description: DUF3387 Location: 10-892 bp Feature: gene Location: 1053-2387 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 1290-1929 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 12 90-192 9 bp Feature: gene Location: 2410-2559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3387 (pfam11867), RVT-G2L4

Seq: CTZA01000715.1 Staphylococcus aureus genome assembly 5364_3#10, scaffold ERS010893.5364_3_10.715, whole genome shotgun sequence (1955 bp)
Overview 1 RT 1: 3-1476 bp Neighborhood of RT #1 [3, 1853] RVT-GII Feature: gene Location: 3-275 bp Feature: gene Location: 378-1853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII