myRT

myRT report for GCA_001242275.1_Salmonella_enterica_CVM_N45935_v1.0

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Seq: LHGY01000007.1 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CVM N45935 N45935_contig_7, whole genome shotgun sequence (4099 bp)
Overview 1 RT 1: 368-2505 bp Neighborhood of RT #1 [368, 2579] CspC RVT-Retrons YjbI Feature: gene Location: 368-571 bp Feature: domain Description: CspC Location: 371-566 bp Feature: domain Description: CspC Location: 371 -566 bp Feature: gene Location: 576-1715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 720-1275 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 720-1 275 bp Feature: gene Location: 1737-1919 bp Feature: gene Location: 2289-2579 bp Feature: domain Description: YjbI Location: 2331-2505 bp Feature: domain Description: YjbI Location: 2331 -2505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), CspC (COG1278), RVT-Retrons

Seq: LHGY01000047.1 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CVM N45935 N45935_contig_47, whole genome shotgun sequence (48741 bp)
Overview 1 RT 1: 113-4922 bp Neighborhood of RT #1 [113, 4927] RVT-Retrons PRK10473 PRK10216 Feature: gene Location: 113-1075 bp Feature: gene Location: 1075-2010 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1186-1771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1186-1771 bp Feature: gene Location: 2812-3999 bp Feature: domain Description: PRK10473 Location: 2815-3991 bp Feature: domain Description: PRK10473 Location: 2 815-3991 bp Feature: gene Location: 3968-4927 bp Feature: domain Description: PRK10216 Location: 3971-4922 bp Feature: domain Description: PRK102 16 Location: 3971-492 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ)