myRT

myRT report for GCA_001243305.1_Salmonella_enterica_CVM_N46836_v1.0

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Seq: LHIM01000028.1 Salmonella enterica subsp. enterica serovar Litchfield strain CVM N46836 N46836_contig_28, whole genome shotgun sequence (59154 bp)
Overview 1 RT 1: 60-6942 bp Neighborhood of RT #1 [60, 6965] Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 CsgD Feature: gene Location: 60-2393 bp Feature: domain Description: Prim_Zn_Ribbon Location: 150-258 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 50-258 bp Feature: domain Description: COG3378 Location: 867-2382 bp Feature: domain Description: COG3378 Location: 867-2382 bp Feature: gene Location: 3006-4613 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3297-3894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3297-3894 bp Feature: domain Description: TIR_2 Location: 4218-4578 bp Feature: domain Description: TIR_2 Location: 421 8-4578 bp Feature: gene Location: 5482-5640 bp Feature: gene Location: 6348-6965 bp Feature: domain Description: CsgD Location: 6768-6942 bp Feature: domain Description: CsgD Location: 6768-6942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )