myRT

myRT report for GCA_001243325.1_Salmonella_enterica_CVM_N46837_v1.0

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Seq: LHIN01000015.1 Salmonella enterica subsp. enterica serovar Litchfield strain CVM N46837 N46837_contig_15, whole genome shotgun sequence (59152 bp)
Overview 1 RT 1: 59-6941 bp Neighborhood of RT #1 [59, 6964] Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 CsgD Feature: gene Location: 59-2392 bp Feature: domain Description: Prim_Zn_Ribbon Location: 149-257 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 49-257 bp Feature: domain Description: COG3378 Location: 866-2381 bp Feature: domain Description: COG3378 Location: 866-2381 bp Feature: gene Location: 3005-4612 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3296-3893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3296-3893 bp Feature: domain Description: TIR_2 Location: 4217-4577 bp Feature: domain Description: TIR_2 Location: 421 7-4577 bp Feature: gene Location: 5481-5639 bp Feature: gene Location: 6347-6964 bp Feature: domain Description: CsgD Location: 6767-6941 bp Feature: domain Description: CsgD Location: 6767-6941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase )