myRT

myRT report for GCA_001244565.1_5139_2_5

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Seq: CWJI01000004.1 Yersinia intermedia genome assembly 5139_2#5, scaffold ERS008476SCcontig000004, whole genome shotgun sequence (250269 bp)
Overview 1 RT 1: 65131-71565 bp Neighborhood of RT #1 [65131, 71570] PRK09678 RVT-UG5 nitrilase PRK09692 SmpB Feature: gene Location: 65131-65376 bp Ori: CRY55135.1 Feature: domain Description: PRK09678 Location: 65134-65290 bp Feature: domain Description: PRK09678 Location: 651 34-65290 bp Feature: gene Location: 65687-66376 bp Feature: gene Location: 66378-69257 bp Ori: CRY55137.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66855-67392 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66855-67392 bp Feature: domain Description: nitrilase Location: 68526-69183 bp Feature: domain Description: nitrilase Location: 68526-691 83 bp Feature: gene Location: 69260-70465 bp Ori: CRY55138.1 Gene: intA1 Feature: domain Description: PRK09692 Location: 69263-70436 bp Feature: domain Description: PRK09692 Location: 69263-70436 bp Feature: gene Location: 71088-71570 bp Ori: CRY55139.1 Gene: smpB Feature: domain Description: SmpB Location: 71118-71565 bp Feature: domain Description: SmpB Location: 71 1 1 8-71 565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional), SmpB (pfam01668)

Seq: CWJI01000001.1 Yersinia intermedia genome assembly 5139_2#5, scaffold ERS008476SCcontig000001, whole genome shotgun sequence (1293290 bp)
Overview 1 RT 1: 627633-633451 bp Neighborhood of RT #1 [627633, 633451] P Q RVT-Retrons Feature: gene Location: 627633-629351 bp Ori: CRY53701.1 Gene: gpP Feature: domain Description: P Location: 627648-629319 bp Feature: domain Description: P Location: 62 7648-62 9319 bp Feature: gene Location: 629354-630388 bp Ori: CRY53702.1 Gene: gpQ Feature: domain Description: Q Location: 629411-630380 bp Feature: domain Description: Q Location: 62 9411-630380 bp Feature: gene Location: 630924-631955 bp Ori: CRY53703.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 631152-631692 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 631152 -631692 bp Feature: gene Location: 632220-632603 bp Feature: gene Location: 632603-633451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons