myRT

myRT report for GCA_001244605.1_5139_2_4

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Seq: CWJK01000007.1 Yersinia kristensenii genome assembly 5139_2#4, scaffold ERS008475SCcontig000007, whole genome shotgun sequence (225065 bp)
Overview 1 RT 1: 209274-216717 bp Neighborhood of RT #1 [209274, 216717] PRK15071 PRK09692 RVT-UG5 nitrilase Feature: gene Location: 209274-210344 bp Ori: CRY64496.1 Gene: lptG Feature: domain Description: PRK15071 Location: 209277-210342 bp Feature: domain Description: PRK1 5071 Location: 209277-21 0342 bp Feature: gene Location: 210730-211980 bp Ori: CRY64498.1 Gene: intB Feature: domain Description: PRK09692 Location: 210739-211939 bp Feature: domain Description: PRK09692 Location: 21 0739-21 1 939 bp Feature: gene Location: 212099-215314 bp Ori: CRY64500.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 212630-213122 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 2630-21 31 22 bp Feature: domain Description: nitrilase Location: 214628-215225 bp Feature: domain Description: nitrilase Location: 21 4628-21 5225 bp Feature: gene Location: 215327-216160 bp Feature: gene Location: 216163-216717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15071 (lipopolysaccharide ABC transporter permease; Provisional), PRK09692 (Integrase; provisional), RVT-UG5, nitrilase (cl11424)

Seq: CWJK01000016.1 Yersinia kristensenii genome assembly 5139_2#4, scaffold ERS008475SCcontig000016, whole genome shotgun sequence (65700 bp)
Overview 1 RT 1: 56794-64092 bp Neighborhood of RT #1 [56794, 64127] DUF1837 BRR2 BRR2 RVT-Retrons ICE_VC0181 Feature: gene Location: 56794-57564 bp Ori: CRY66617.1 Feature: domain Description: DUF1837 Location: 57001-57331 bp Feature: domain Description: DUF1837 Location: 57001-57331 bp Feature: gene Location: 57557-61081 bp Ori: CRY66618.1 Feature: domain Description: BRR2 Location: 58472-59066 bp Feature: domain Description: BRR2 Location: 58472 -59066 bp Feature: domain Description: BRR2 Location: 59126-59705 bp Feature: domain Description: BRR2 Location: 5912 6-59705 bp Feature: gene Location: 61566-62756 bp Ori: CRY66619.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61713-62286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61713-62 2 86 bp Feature: gene Location: 62743-63456 bp Feature: gene Location: 63648-64127 bp Ori: CRY66621.1 Feature: domain Description: ICE_VC0181 Location: 63714-64092 bp Feature: domain Description: ICE_VC0181 Location: 63714-64092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-Retrons, ICE_VC0181 (TIGR02256)