myRT

myRT report for GCA_001244675.1_5139_5_2

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Seq: CWJO01000001.1 Yersinia intermedia genome assembly 5139_5#2, scaffold ERS008497SCcontig000001, whole genome shotgun sequence (1215988 bp)
Overview 1 RT 1: 611745-622888 bp Neighborhood of RT #1 [611745, 622938] DUF4917 AAA_15 RVT-Retrons PRK09935 PRK09959 HPtr Feature: gene Location: 611745-612764 bp Ori: CRY76049.1 Feature: domain Description: DUF4917 Location: 611805-612729 bp Feature: domain Description: DUF491 7 Location: 61 1 805-61 2729 bp Feature: gene Location: 614163-616409 bp Ori: CRY76051.1 Feature: domain Description: AAA_15 Location: 614166-615174 bp Feature: domain Description: AAA_1 5 Location: 61 41 66-61 51 74 bp Feature: gene Location: 616525-617625 bp Ori: CRY76053.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 616705-617236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 6705-61 7236 bp Feature: gene Location: 618465-619097 bp Ori: CRY76055.1 Gene: bvgA_1 Feature: domain Description: PRK09935 Location: 618474-619095 bp Feature: domain Description: PRK09935 Location: 61 8474-61 9095 bp Feature: gene Location: 619072-622938 bp Ori: CRY76056.1 Gene: bvgS_1 Feature: domain Description: PRK09959 Location: 619360-622435 bp Feature: domain Description: PRK09959 Location: 61 9360-622435 bp Feature: domain Description: HPtr Location: 622564-622888 bp Feature: domain Description: HPtr Location: 622564-622888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, PRK09935 (fimbriae biosynthesis transcriptional regulator FimZ), PRK09959 (acid-sensing system histidine kinase EvgS), HPtr (COG2198)