myRT

myRT report for GCA_001244995.1_Intestinimonas_massiliensis

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Seq: LN869529.1 Intestinimonas sp. GD2 genome assembly Intestinimonas massiliensis, scaffold scaffold00007, whole genome shotgun sequence (2281024 bp)
Overview 1 RT 1: 416490-422695 bp 2 RT 2: 1711568-1716966 bp Neighborhood of RT #1 [416490, 422718] HTH_17 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-Retrons HTH_TipAL-Mta TipAS pPIWI_RE_Y pPIWI_RE_REase Neighborhood of RT #2 [1711568, 1716966] Tail_P2_I RVT-DGRs Feature: gene Location: 416490-416648 bp Feature: domain Description: HTH_17 Location: 416505-416622 bp Feature: domain Description: HTH_1 7 Location: 41 6505-41 6622 bp Feature: gene Location: 416703-417932 bp Feature: domain Description: Phage_int_SAM_3 Location: 416916-417084 bp Feature: domain Description: Phage_int_SAM_3 Location: 41 691 6-41 7084 bp Feature: domain Description: INT_ICEBs1_C_like Location: 417285-417792 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 41 7285-41 7792 bp Feature: gene Location: 417971-419674 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 418097-418700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 8097-41 8700 bp Feature: gene Location: 420486-421202 bp Feature: domain Description: HTH_TipAL-Mta Location: 420492-420795 bp Feature: domain Description: HTH_TipAL-Mta Location: 420492-420795 bp Feature: domain Description: TipAS Location: 420858-421191 bp Feature: domain Description: TipAS Location: 420858-421 1 91 bp Feature: gene Location: 421609-422718 bp Feature: domain Description: pPIWI_RE_Y Location: 421627-422083 bp Feature: domain Description: pPIWI_RE_Y Location: 421 627-422083 bp Feature: domain Description: pPIWI_RE_REase Location: 422356-422695 bp Feature: domain Description: pPIWI_RE_REase Location: 422356-422695 bp Feature: gene Location: 1711568-1712155 bp Feature: domain Description: Tail_P2_I Location: 1711649-1712042 bp Feature: domain Description: Tail_P2_I Location: 1 71 1 649-1 71 2042 bp Feature: gene Location: 1712173-1714881 bp Feature: gene Location: 1715085-1716458 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1715577-1716177 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 71 5577-1 71 61 77 bp Feature: gene Location: 1716400-1716822 bp Feature: gene Location: 1716826-1716966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-Retrons, HTH_TipAL-Mta (cd01106), TipAS (pfam07739), pPIWI_RE_Y (pfam18156), pPIWI_RE_REase (pfam18154), Tail_P2_I (pfam09684), RVT-DGRs