myRT

myRT report for GCA_001247045.1_Sg_201311953_TACAGC_L001

Download annotations/find similar RTs

Seq: CWUU01000015.1 Shigella sonnei genome assembly Sg_201311953_TACAGC_L001, scaffold SCcontig000015, whole genome shotgun sequence (52540 bp)
Overview 1 RT 1: 45449-52401 bp Neighborhood of RT #1 [45449, 52401] Ail_Lom phage_tail_N 7tmA_amine_R-like Collar RVT-UG17 SLATT_5 Feature: gene Location: 45449-46048 bp Ori: CSG46196.1 Gene: ompX_2 Feature: domain Description: Ail_Lom Location: 45452-46046 bp Feature: domain Description: Ail_Lom Location: 45452-46046 bp Feature: gene Location: 46113-49511 bp Ori: CSG46204.1 Feature: domain Description: phage_tail_N Location: 46116-46515 bp Feature: domain Description: phage_tail_N Location: 461 1 6-4651 5 bp Feature: domain Description: 7tmA_amine_R-like Location: 47022-47439 bp Feature: domain Description: 7tmA_amine_R-like Location: 47022-47439 bp Feature: domain Description: Collar Location: 48834-48972 bp Feature: domain Description: Collar Location: 48834-48972 bp Feature: gene Location: 50208-51578 bp Ori: CSG46209.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 50436-51042 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 50436-51 042 bp Feature: gene Location: 51556-52107 bp Ori: CSG46212.1 Feature: domain Description: SLATT_5 Location: 51562-52078 bp Feature: domain Description: SLATT_5 Location: 51 562-52078 bp Feature: gene Location: 52234-52401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Collar (pfam07484), RVT-UG17, SLATT_5 (pfam18160)