myRT

myRT report for GCA_001247885.1_4075_3_12

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Seq: CWQN01000005.1 Vibrio cholerae genome assembly 4075_3#12, scaffold ERS013147SCcontig000005, whole genome shotgun sequence (236186 bp)
Overview 1 RT 1: 123740-128975 bp Neighborhood of RT #1 [123740, 129001] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123740-124357 bp Ori: CSB95453.1 Feature: domain Description: TIGR02646 Location: 123851-124235 bp Feature: domain Description: TIGR02646 Location: 1 23851 -1 24235 bp Feature: gene Location: 124370-125992 bp Ori: CSB95491.1 Feature: domain Description: COG3950 Location: 124556-125987 bp Feature: domain Description: COG3950 Location: 1 24556-1 25987 bp Feature: gene Location: 125993-126940 bp Ori: CSB95526.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126107-126704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 261 07-1 26704 bp Feature: gene Location: 127426-128211 bp Ori: CSB95557.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 127435-128206 bp Feature: domain Description: PRK1 0621 Location: 1 27435-1 28206 bp Feature: gene Location: 128141-129001 bp Ori: CSB95591.1 Feature: domain Description: LysR Location: 128147-128975 bp Feature: domain Description: LysR Location: 1 281 47-1 28975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)