myRT

myRT report for GCA_001248505.1_5174_6_8

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Seq: CWRZ01000005.1 Vibrio cholerae genome assembly 5174_6#8, scaffold ERS013239SCcontig000005, whole genome shotgun sequence (332866 bp)
Overview 1 RT 1: 106998-112137 bp Neighborhood of RT #1 [106998, 112259] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 106998-107858 bp Ori: CSD71854.1 Feature: domain Description: LysR Location: 107004-107832 bp Feature: domain Description: LysR Location: 1 07004-1 07832 bp Feature: gene Location: 107788-108573 bp Ori: CSD71887.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 107797-108568 bp Feature: domain Description: PRK1 0621 Location: 1 07797-1 08568 bp Feature: gene Location: 109059-110006 bp Ori: CSD71912.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109173-109770 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 091 73-1 09770 bp Feature: gene Location: 110007-111629 bp Ori: CSD71956.1 Feature: domain Description: COG3950 Location: 110193-111624 bp Feature: domain Description: COG3950 Location: 1 1 01 93-1 1 1 624 bp Feature: gene Location: 111642-112259 bp Ori: CSD71994.1 Feature: domain Description: TIGR02646 Location: 111753-112137 bp Feature: domain Description: TIGR02646 Location: 1 1 1 753-1 1 21 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)