myRT

myRT report for GCA_001248525.1_Sg_201400893_GGCTAC_L001

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Seq: CWVN01000064.1 Shigella sonnei genome assembly Sg_201400893_GGCTAC_L001, scaffold SCcontig000064, whole genome shotgun sequence (23342 bp)
Overview 1 RT 1: 177-5968 bp Neighborhood of RT #1 [177, 5968] Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 177-914 bp Feature: gene Location: 1045-3078 bp Ori: CSH92160.1 Feature: domain Description: Phage_fiber_2 Location: 1066-1186 bp Feature: domain Description: Phage_fiber_2 Location: 1 066-1 1 86 bp Feature: domain Description: Collar Location: 2401-2539 bp Feature: domain Description: Collar Location: 2401 -2539 bp Feature: domain Description: Phage_fiber Location: 2590-2629 bp Feature: domain Description: Phage_fiber Location: 2590-2629 bp Feature: domain Description: Phage_fiber Location: 2686-2725 bp Feature: domain Description: Phage_fiber Location: 2686-2725 bp Feature: domain Description: Phage_fiber Location: 2881-2920 bp Feature: domain Description: Phage_fiber Location: 2881 -2920 bp Feature: domain Description: Phage_fiber Location: 2926-2959 bp Feature: domain Description: Phage_fiber Location: 2926-2959 bp Feature: gene Location: 3775-5145 bp Ori: CSH92175.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4003-4609 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4003-4609 bp Feature: gene Location: 5123-5674 bp Ori: CSH92194.1 Feature: domain Description: SLATT_5 Location: 5129-5645 bp Feature: domain Description: SLATT_5 Location: 51 29-5645 bp Feature: gene Location: 5801-5968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)