myRT

myRT report for GCA_001248865.1_4056_7_11

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Seq: CWPN01000003.1 Vibrio cholerae genome assembly 4056_7#11, scaffold ERS013185SCcontig000003, whole genome shotgun sequence (346577 bp)
Overview 1 RT 1: 217280-222417 bp Neighborhood of RT #1 [217280, 222539] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 217280-218140 bp Ori: CSB24643.1 Feature: domain Description: LysR Location: 217286-218114 bp Feature: domain Description: LysR Location: 21 7286-21 81 1 4 bp Feature: gene Location: 218070-218855 bp Ori: CSB24653.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 218079-218850 bp Feature: domain Description: PRK1 0621 Location: 21 8079-21 8850 bp Feature: gene Location: 219390-220286 bp Ori: CSB24664.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 219453-220050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 9453-220050 bp Feature: gene Location: 220287-221909 bp Ori: CSB24676.1 Feature: domain Description: COG3950 Location: 220473-221904 bp Feature: domain Description: COG3950 Location: 220473-221 904 bp Feature: gene Location: 221922-222539 bp Ori: CSB24688.1 Feature: domain Description: TIGR02646 Location: 222033-222417 bp Feature: domain Description: TIGR02646 Location: 222033-22241 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)