myRT

myRT report for GCA_001248945.1_4056_7_5

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Seq: CWPS01000004.1 Vibrio cholerae genome assembly 4056_7#5, scaffold ERS013191SCcontig000004, whole genome shotgun sequence (347227 bp)
Overview 1 RT 1: 124022-129252 bp Neighborhood of RT #1 [124022, 129278] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 124022-124639 bp Ori: CSB42528.1 Feature: domain Description: TIGR02646 Location: 124133-124517 bp Feature: domain Description: TIGR02646 Location: 1 241 33-1 2451 7 bp Feature: gene Location: 124652-126274 bp Ori: CSB42544.1 Feature: domain Description: COG3950 Location: 124838-126269 bp Feature: domain Description: COG3950 Location: 1 24838-1 26269 bp Feature: gene Location: 126275-127222 bp Ori: CSB42566.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126389-126986 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26389-1 26986 bp Feature: gene Location: 127691-128488 bp Ori: CSB42583.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 127700-128483 bp Feature: domain Description: PRK1 0621 Location: 1 27700-1 28483 bp Feature: gene Location: 128418-129278 bp Ori: CSB42604.1 Feature: domain Description: LysR Location: 128424-129252 bp Feature: domain Description: LysR Location: 1 28424-1 29252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)