myRT

myRT report for GCA_001249275.1_Sg_201312374_TCATTC_L001

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Seq: CWUW01000007.1 Shigella sonnei genome assembly Sg_201312374_TCATTC_L001, scaffold SCcontig000007, whole genome shotgun sequence (70181 bp)
Overview 1 RT 1: 17375-23377 bp Neighborhood of RT #1 [17375, 23377] SLATT_5 RVT-UG17 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 17375-17542 bp Feature: gene Location: 17669-18220 bp Ori: CSG57649.1 Feature: domain Description: SLATT_5 Location: 17675-18191 bp Feature: domain Description: SLATT_5 Location: 1 7675-1 81 91 bp Feature: gene Location: 18198-19568 bp Ori: CSG57658.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18426-19032 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 8426-1 9032 bp Feature: gene Location: 20476-22509 bp Ori: CSG57665.1 Feature: domain Description: Phage_fiber_2 Location: 20497-20617 bp Feature: domain Description: Phage_fiber_2 Location: 20497-2061 7 bp Feature: domain Description: Collar Location: 21832-21970 bp Feature: domain Description: Collar Location: 21 832-21 970 bp Feature: domain Description: Phage_fiber Location: 22021-22060 bp Feature: domain Description: Phage_fiber Location: 22021 -22060 bp Feature: domain Description: Phage_fiber Location: 22117-22156 bp Feature: domain Description: Phage_fiber Location: 221 1 7-221 56 bp Feature: domain Description: Phage_fiber Location: 22312-22351 bp Feature: domain Description: Phage_fiber Location: 2231 2-22351 bp Feature: domain Description: Phage_fiber Location: 22357-22390 bp Feature: domain Description: Phage_fiber Location: 22357-22390 bp Feature: gene Location: 22640-23377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335)