myRT

myRT report for GCA_001249295.1_Sg_201400049_GCCAAT_L001

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Seq: CWVE01000007.1 Shigella sonnei genome assembly Sg_201400049_GCCAAT_L001, scaffold SCcontig000007, whole genome shotgun sequence (69816 bp)
Overview 1 RT 1: 45466-52449 bp Neighborhood of RT #1 [45466, 52449] Ail_Lom phage_tail_N 7tmA_amine_R-like Collar RVT-UG17 SLATT_5 Feature: gene Location: 45466-46065 bp Ori: CSG90278.1 Gene: ompX_2 Feature: domain Description: Ail_Lom Location: 45469-46063 bp Feature: domain Description: Ail_Lom Location: 45469-46063 bp Feature: gene Location: 46130-49528 bp Ori: CSG90290.1 Feature: domain Description: phage_tail_N Location: 46133-46532 bp Feature: domain Description: phage_tail_N Location: 461 33-46532 bp Feature: domain Description: 7tmA_amine_R-like Location: 47039-47456 bp Feature: domain Description: 7tmA_amine_R-like Location: 47039-47456 bp Feature: domain Description: Collar Location: 48851-48989 bp Feature: domain Description: Collar Location: 48851 -48989 bp Feature: gene Location: 50256-51626 bp Ori: CSG90296.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 50484-51090 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 50484-51 090 bp Feature: gene Location: 51604-52155 bp Ori: CSG90306.1 Feature: domain Description: SLATT_5 Location: 51610-52126 bp Feature: domain Description: SLATT_5 Location: 51 61 0-521 26 bp Feature: gene Location: 52282-52449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), 7tmA_amine_R-like (cd14967), Collar (pfam07484), RVT-UG17, SLATT_5 (pfam18160)