myRT

myRT report for GCA_001249555.1_Sg_201401054_AGTCAA_L001

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Seq: CWVM01000001.1 Shigella sonnei genome assembly Sg_201401054_AGTCAA_L001, scaffold SCcontig000001, whole genome shotgun sequence (90395 bp)
Overview 1 RT 1: 17375-23896 bp Neighborhood of RT #1 [17375, 23898] SLATT_5 RVT-UG17 phage_tail_N Collar Ail_Lom Feature: gene Location: 17375-17542 bp Feature: gene Location: 17669-18220 bp Ori: CSH11023.1 Feature: domain Description: SLATT_5 Location: 17675-18191 bp Feature: domain Description: SLATT_5 Location: 1 7675-1 81 91 bp Feature: gene Location: 18198-19568 bp Ori: CSH11034.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18426-19032 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 8426-1 9032 bp Feature: gene Location: 20265-23663 bp Ori: CSH11041.1 Feature: domain Description: phage_tail_N Location: 20268-20667 bp Feature: domain Description: phage_tail_N Location: 20268-20667 bp Feature: domain Description: Collar Location: 22986-23124 bp Feature: domain Description: Collar Location: 22986-231 24 bp Feature: gene Location: 23728-23898 bp Ori: CSH11050.1 Gene: ail Feature: domain Description: Ail_Lom Location: 23731-23896 bp Feature: domain Description: Ail_Lom Location: 23731 -23896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Collar (pfam07484), Ail_Lom (pfam06316)