myRT

myRT report for GCA_001249715.1_4075_3_2

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Seq: CWQK01000004.1 Vibrio cholerae genome assembly 4075_3#2, scaffold ERS013146SCcontig000004, whole genome shotgun sequence (344427 bp)
Overview 1 RT 1: 215610-220749 bp Neighborhood of RT #1 [215610, 220871] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 215610-216470 bp Ori: CSB86754.1 Feature: domain Description: LysR Location: 215616-216444 bp Feature: domain Description: LysR Location: 21 561 6-21 6444 bp Feature: gene Location: 216400-217185 bp Ori: CSB86775.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 216409-217180 bp Feature: domain Description: PRK1 0621 Location: 21 6409-21 71 80 bp Feature: gene Location: 217671-218618 bp Ori: CSB86796.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 217785-218382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 7785-21 8382 bp Feature: gene Location: 218619-220241 bp Ori: CSB86829.1 Feature: domain Description: COG3950 Location: 218805-220236 bp Feature: domain Description: COG3950 Location: 21 8805-220236 bp Feature: gene Location: 220254-220871 bp Ori: CSB86854.1 Feature: domain Description: TIGR02646 Location: 220365-220749 bp Feature: domain Description: TIGR02646 Location: 220365-220749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)