myRT

myRT report for GCA_001250115.1_12971_8_18

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Seq: CWXL01000058.1 Shigella sonnei genome assembly 12971_8#18, scaffold ERS432238SCcontig000058, whole genome shotgun sequence (23078 bp)
Overview 1 RT 1: 211-5711 bp Neighborhood of RT #1 [211, 5711] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 211-1368 bp Feature: gene Location: 1697-2821 bp Ori: CSJ68905.1 Feature: domain Description: Collar Location: 2192-2330 bp Feature: domain Description: Collar Location: 21 92-2330 bp Feature: domain Description: Phage_fiber Location: 2381-2420 bp Feature: domain Description: Phage_fiber Location: 2381 -2420 bp Feature: domain Description: Phage_fiber Location: 2477-2516 bp Feature: domain Description: Phage_fiber Location: 2477-251 6 bp Feature: domain Description: Phage_fiber Location: 2522-2549 bp Feature: domain Description: Phage_fiber Location: 2522-2549 bp Feature: domain Description: Phage_fiber Location: 2624-2663 bp Feature: domain Description: Phage_fiber Location: 2624-2663 bp Feature: domain Description: Phage_fiber Location: 2669-2699 bp Feature: domain Description: Phage_fiber Location: 2669-2699 bp Feature: gene Location: 3518-4888 bp Ori: CSJ68922.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3746-4352 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3746-4352 bp Feature: gene Location: 4866-5417 bp Ori: CSJ68938.1 Feature: domain Description: SLATT_5 Location: 4872-5388 bp Feature: domain Description: SLATT_5 Location: 4872-5388 bp Feature: gene Location: 5544-5711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)