myRT

myRT report for GCA_001250515.1_6350_1_2

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Seq: CXFQ01000172.1 Shigella sonnei genome assembly 6350_1#2, scaffold ERS025877SCcontig000172, whole genome shotgun sequence (7877 bp)
Overview 1 RT 1: 3417-7383 bp Neighborhood of RT #1 [3417, 7445] prfC PRK10597 RVT-Retrons TIR_2 Feature: gene Location: 3417-5003 bp Ori: CST52904.1 Gene: prfC Feature: domain Description: prfC Location: 3435-5001 bp Feature: domain Description: prfC Location: 3435-5001 bp Feature: gene Location: 5223-5483 bp Ori: CST52909.1 Gene: dinI_4 Feature: domain Description: PRK10597 Location: 5226-5466 bp Feature: domain Description: PRK1 0597 Location: 5226-5466 bp Feature: gene Location: 5817-7445 bp Ori: CST52916.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6132-6723 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 32-6723 bp Feature: domain Description: TIR_2 Location: 7050-7383 bp Feature: domain Description: TIR_2 Location: 7050-7383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676)