myRT

myRT report for GCA_001250795.1_4056_2_2

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Seq: CWNW01000006.1 Vibrio cholerae genome assembly 4056_2#2, scaffold ERS013134SCcontig000006, whole genome shotgun sequence (235912 bp)
Overview 1 RT 1: 107147-112286 bp Neighborhood of RT #1 [107147, 112408] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 107147-108007 bp Ori: CSA24956.1 Feature: domain Description: LysR Location: 107153-107981 bp Feature: domain Description: LysR Location: 1 071 53-1 07981 bp Feature: gene Location: 107937-108722 bp Ori: CSA25015.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 107946-108717 bp Feature: domain Description: PRK1 0621 Location: 1 07946-1 0871 7 bp Feature: gene Location: 109208-110155 bp Ori: CSA25062.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109322-109919 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 09322-1 0991 9 bp Feature: gene Location: 110156-111778 bp Ori: CSA25118.1 Feature: domain Description: COG3950 Location: 110342-111773 bp Feature: domain Description: COG3950 Location: 1 1 0342-1 1 1 773 bp Feature: gene Location: 111791-112408 bp Ori: CSA25148.1 Feature: domain Description: TIGR02646 Location: 111902-112286 bp Feature: domain Description: TIGR02646 Location: 1 1 1 902-1 1 2286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)