myRT

myRT report for GCA_001251495.1_4075_3_1

Download annotations/find similar RTs

Seq: CWQE01000003.1 Vibrio cholerae genome assembly 4075_3#1, scaffold ERS013136SCcontig000003, whole genome shotgun sequence (348582 bp)
Overview 1 RT 1: 214643-219268 bp Neighborhood of RT #1 [214643, 219273] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 214643-215503 bp Ori: CSB58022.1 Feature: domain Description: LysR Location: 214649-215477 bp Feature: domain Description: LysR Location: 21 4649-21 5477 bp Feature: gene Location: 215433-216218 bp Ori: CSB58045.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 215442-216213 bp Feature: domain Description: PRK1 0621 Location: 21 5442-21 621 3 bp Feature: gene Location: 216704-217651 bp Ori: CSB58069.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 216818-217415 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 681 8-21 741 5 bp Feature: gene Location: 217652-218449 bp Ori: CSB58091.1 Feature: domain Description: COG3950 Location: 217838-218393 bp Feature: domain Description: COG3950 Location: 21 7838-21 8393 bp Feature: gene Location: 218662-219273 bp Ori: CSB58116.1 Feature: domain Description: COG3950 Location: 218665-219268 bp Feature: domain Description: COG3950 Location: 21 8665-21 9268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )